miRBase entry: ocu-mir-193b

Stem-loop ocu-mir-193b

Accession

MI0039331

Description

Oryctolagus cuniculus ocu-mir-193b precursor miRNA

Sequence

CGGGGUUUUGAGGGCGAGAUGAguuuauguuuuauccAACUGGCCCACAAAGUCCCGCU
((((((((((.((((.((.((.((.........)).)).)).)))).))))))))))..

Structure

--          A    G  A  A  uua 
  CGGGGUUUUG GGGC AG UG gu   u
  |||||||||| |||| || || ||   g
  GCCCUGAAAC CCCG UC Ac ua   u
UC          A    G  A  c  uuu

Annotation confidence Not enough data

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Genome context

CM000795.1: 7412259-7412317 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-193b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-193b-5p

Accession	MIMAT0048305
Description	Oryctolagus cuniculus ocu-miR-193b-5p mature miRNA
Sequence	1 - CGGGGUUUUGAGGGCGAGAUGA - 22
Evidence	experimental Illumina [1]

Mature ocu-miR-193b-3p

Accession	MIMAT0048306
Description	Oryctolagus cuniculus ocu-miR-193b-3p mature miRNA
Sequence	38 - AACUGGCCCACAAAGUCCCGCU - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344