miRBase entry: ocu-mir-195

Stem-loop ocu-mir-195


Accession
MI0039333
Description
Oryctolagus cuniculus ocu-mir-195 precursor miRNA


Sequence

UAGCAGCACAGAAAUAUUGGCAccgggaggcgagucugCCAAUAUUGGCUGUGCUGCUCCAggc
.((((((((((.(((((((((((((.....)).))..)))))))))..))))))))))......

Structure
-----U          -A         --  -  g 
      AGCAGCACAG  AAUAUUGGC  Ac cg g
      ||||||||||  |||||||||  || || a
      UCGUCGUGUC  UUAUAACCg  ug gc g
cggACC          GG         uc  a  g 


Annotation confidence Not enough data
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Genome context
CM000808.1: 12026542-12026605 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ocu-mir-195
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-195-5p

Accession MIMAT0048309
Description Oryctolagus cuniculus ocu-miR-195-5p mature miRNA
Sequence 1 - UAGCAGCACAGAAAUAUUGGCA - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-195-3p

Accession MIMAT0048310
Description Oryctolagus cuniculus ocu-miR-195-3p mature miRNA
Sequence 39 - CCAAUAUUGGCUGUGCUGCUCCA - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344