Stem-loop ocu-mir-196b

Accession

MI0039336

Description

Oryctolagus cuniculus ocu-mir-196b precursor miRNA

Literature search

1 open access papers mention ocu-mir-196b
(1 sentences)

Sequence

UAGGUAGUUUCCUGUUGUUGGGAuccaccuuucucUCGACAGCACGACACUGCCUUCA
.(((((((.((.(((((((((((..........))))))))))).)).)))))))...

Structure

--U       U  C           ucca 
   AGGUAGU UC UGUUGUUGGGA    c
   ||||||| || |||||||||||     
   UCCGUCA AG ACGACAGCUcu    c
ACU       C  C           cuuu 

Annotation confidence Not enough data

Genome context

CM000799.1: 11887975-11888032 [-]

Mature ocu-miR-196b-5p

• Accession: MIMAT0048315
• Description: Oryctolagus cuniculus ocu-miR-196b-5p mature miRNA
• Sequence: 1 - UAGGUAGUUUCCUGUUGUUGGGA - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-196b-3p

• Accession: MIMAT0048316
• Description: Oryctolagus cuniculus ocu-miR-196b-3p mature miRNA
• Sequence: 36 - UCGACAGCACGACACUGCCUUCA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344