miRBase entry: ocu-mir-329

Stem-loop ocu-mir-329

Accession

MI0039369

Description

Oryctolagus cuniculus ocu-mir-329 precursor miRNA

Sequence

AGAGGUUUUCUGGGUUUCUGUUUCuuggaugaggaugaAACACACCUGGUUAGCCUCUUU
(((((((..((((((...((((((............)))))).))))))..)))))))..

Structure

--       UU      UUC      uugga 
  AGAGGUU  CUGGGU   UGUUUC     u
  |||||||  ||||||   ||||||      
  UCUCCGA  GGUCCA   ACAAag     g
UU       UU      --C      uagga

Annotation confidence Not enough data

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Genome context

GL019048.1: 126028-126087 [+]

Clustered miRNAs

12 other miRNAs are < 10 kb from ocu-mir-329

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-329-5p

Accession	MIMAT0048378
Description	Oryctolagus cuniculus ocu-miR-329-5p mature miRNA
Sequence	1 - AGAGGUUUUCUGGGUUUCUGUUUC - 24
Evidence	experimental Illumina [1]

Mature ocu-miR-329-3p

Accession	MIMAT0048379
Description	Oryctolagus cuniculus ocu-miR-329-3p mature miRNA
Sequence	39 - AACACACCUGGUUAGCCUCUUU - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344