miRBase entry: ocu-mir-374b

Stem-loop ocu-mir-374b


Accession
MI0039385
Description
Oryctolagus cuniculus ocu-mir-374b precursor miRNA


Sequence

AUAUAAUACAACCUGCUAAGUGuccuagcaCUUAGCAGGUUGUAUUAUCAUU
..(((((((((((((((((((((....)))))))))))))))))))))....

Structure
--AU                     c 
    AUAAUACAACCUGCUAAGUGu c
    |||||||||||||||||||||  
    UAUUAUGUUGGACGAUUCacg u
UUAC                     a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
GL018757.1: 1593276-1593327 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ocu-mir-374b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-374b-5p

Accession MIMAT0048408
Description Oryctolagus cuniculus ocu-miR-374b-5p mature miRNA
Sequence 1 - AUAUAAUACAACCUGCUAAGUG - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-374b-3p

Accession MIMAT0048409
Description Oryctolagus cuniculus ocu-miR-374b-3p mature miRNA
Sequence 31 - CUUAGCAGGUUGUAUUAUCAUU - 52
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344