miRBase entry: ocu-mir-378

Stem-loop ocu-mir-378


Accession
MI0039392
Description
Oryctolagus cuniculus ocu-mir-378 precursor miRNA


Sequence

CUCCUGACUCCAGGUCCUGUGUguuaccucgaaauagcACUGGACUUGGAGUCAGAAGGC
((.((((((((((((((.((((..(........)..)))).)))))))))))))).))..

Structure
--  C              U    gu acc 
  CU CUGACUCCAGGUCC GUGU  u   u
  || |||||||||||||| ||||  |    
  GA GACUGAGGUUCAGG CAcg  a   c
CG  A              U    au aag 


Annotation confidence Not enough data
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Genome context
CM000792.1: 31535185-31535244 [+]

Database links

Mature ocu-miR-378-5p

Accession MIMAT0048421
Description Oryctolagus cuniculus ocu-miR-378-5p mature miRNA
Sequence 1 - CUCCUGACUCCAGGUCCUGUGU - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-378-3p

Accession MIMAT0048422
Description Oryctolagus cuniculus ocu-miR-378-3p mature miRNA
Sequence 39 - ACUGGACUUGGAGUCAGAAGGC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344