Stem-loop ocu-mir-409

Accession

MI0039398

Description

Oryctolagus cuniculus ocu-mir-409 precursor miRNA

Sequence

AGGUUACCCGAGCAACUUUGCAUCuggacgacGAAUGUUGCUCGGUGAACCCCU
.((((..((((((((((((((........).)))).)))))))))..))))...

Structure

--A    AC         -    - AUC 
   GGUU  CCGAGCAAC UUUG C   u
   ||||  ||||||||| |||| |    
   CCAA  GGCUCGUUG AAGc g   g
UCC    GU         U    a cag 

Annotation confidence Not enough data

Genome context

GL019048.1: 152734-152787 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from ocu-mir-409

Mature ocu-miR-409-5p

• Accession: MIMAT0048433
• Description: Oryctolagus cuniculus ocu-miR-409-5p mature miRNA
• Sequence: 1 - AGGUUACCCGAGCAACUUUGCAUC - 24
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-409-3p

• Accession: MIMAT0048434
• Description: Oryctolagus cuniculus ocu-miR-409-3p mature miRNA
• Sequence: 33 - GAAUGUUGCUCGGUGAACCCCU - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344