miRBase entry: ocu-mir-490

Stem-loop ocu-mir-490


Accession
MI0039422
Description
Oryctolagus cuniculus ocu-mir-490 precursor miRNA


Sequence

CCAUGGAUCUCCAGGUGGGUcacguuuagagaugcacCAACCUGGAGGACUCCAUGCUGU
.(((((((((((((((.(((..((((....)))).))).)))))))))..))))))....

Structure
---C      --         G   ca    u 
    CAUGGA  UCUCCAGGU GGU  cguu a
    ||||||  ||||||||| |||  ||||  
    GUACCU  GGAGGUCCA Cca  guag g
UGUC      CA         A   -c    a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
CM000796.1: 1159609-1159668 [+]

Database links

Mature ocu-miR-490-5p

Accession MIMAT0048479
Description Oryctolagus cuniculus ocu-miR-490-5p mature miRNA
Sequence 1 - CCAUGGAUCUCCAGGUGGGU - 20
Evidence experimental
Illumina [1]

Mature ocu-miR-490-3p

Accession MIMAT0048480
Description Oryctolagus cuniculus ocu-miR-490-3p mature miRNA
Sequence 38 - CAACCUGGAGGACUCCAUGCUGU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344