miRBase entry: ocu-mir-496

Stem-loop ocu-mir-496


Accession
MI0039425
Description
Oryctolagus cuniculus ocu-mir-496 precursor miRNA


Sequence

GGUUGUCCAUGGUGUGUUCAUUuuauuuaugaUGAGUAUUACAUGGCCAAUCUC
(((((.(((((..(((((((((........)))))))))..))))).)))))..

Structure
--     U     GU         uua 
  GGUUG CCAUG  GUGUUCAUU   u
  ||||| |||||  |||||||||    
  CUAAC GGUAC  UAUGAGUag   u
CU     C     AU         uau 


Annotation confidence Not enough data
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Genome context
GL019048.1: 149012-149065 [+]
Clustered miRNAs
12 other miRNAs are < 10 kb from ocu-mir-496
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-496-5p

Accession MIMAT0048485
Description Oryctolagus cuniculus ocu-miR-496-5p mature miRNA
Sequence 1 - GGUUGUCCAUGGUGUGUUCAUU - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-496-3p

Accession MIMAT0048486
Description Oryctolagus cuniculus ocu-miR-496-3p mature miRNA
Sequence 33 - UGAGUAUUACAUGGCCAAUCUC - 54
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344