miRBase entry: ocu-mir-502b

Stem-loop ocu-mir-502b


Accession
MI0039431
Description
Oryctolagus cuniculus ocu-mir-502b precursor miRNA


Sequence

UAAUCCUUGAUACCUGGUGUUAGUgcuuucuaugugcAAUGCACCUGGGCAAGGAUUUAGA
.((((((((...((.(((((..((((.......))))...))))).)).))))))))....

Structure
---U        AUA  U     -UA    uu 
    AAUCCUUG   CC GGUGU   GUgc  u
    ||||||||   || |||||   ||||  c
    UUAGGAAC   GG CCACG   cgug  u
AGAU        --G  U     UAA    ua 


Annotation confidence Not enough data
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Genome context
CM000811.1: 34235397-34235457 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from ocu-mir-502b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-502b-5p

Accession MIMAT0048497
Description Oryctolagus cuniculus ocu-miR-502b-5p mature miRNA
Sequence 1 - UAAUCCUUGAUACCUGGUGUUAGU - 24
Evidence experimental
Illumina [1]

Mature ocu-miR-502b-3p

Accession MIMAT0048498
Description Oryctolagus cuniculus ocu-miR-502b-3p mature miRNA
Sequence 38 - AAUGCACCUGGGCAAGGAUUUAGA - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344