miRBase entry: ocu-mir-506

Stem-loop ocu-mir-506

Accession

MI0039435

Description

Oryctolagus cuniculus ocu-mir-506 precursor miRNA

Sequence

UACUCAGGAAGGCAUUAUUCAuguauuuugaugugugAAUGGUACACUUCUGAGUAGA
(((((((((..(.(((((((((((((....))))))))))))).)..)))))))))..

Structure

--         AG C             u 
  UACUCAGGA  G AUUAUUCAuguau u
  |||||||||  | |||||||||||||  
  AUGAGUCUU  C UGGUAAgugugua u
AG         CA A             g

Annotation confidence Not enough data

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Genome context

GL018700.1: 10694554-10694611 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-506

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-506-5p

Accession	MIMAT0048505
Description	Oryctolagus cuniculus ocu-miR-506-5p mature miRNA
Sequence	1 - UACUCAGGAAGGCAUUAUUCA - 21
Evidence	experimental Illumina [1]

Mature ocu-miR-506-3p

Accession	MIMAT0048506
Description	Oryctolagus cuniculus ocu-miR-506-3p mature miRNA
Sequence	38 - AAUGGUACACUUCUGAGUAGA - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344