miRBase entry: ocu-mir-508

Stem-loop ocu-mir-508

Accession

MI0039437

Description

Oryctolagus cuniculus ocu-mir-508 precursor miRNA

Sequence

UACUCCAGAGGGUGUCACUCAcauugccuaaagcaugAUUGUCACCUUUUUGAGUAGA
(((((.((((((((.((.(((...(((.....)))))).)).)))))))).)))))..

Structure

--     C        U  C   cau   c 
  UACUC AGAGGGUG CA UCA   ugc u
  ||||| |||||||| || |||   ||| a
  AUGAG UUUUCCAC GU Agu   acg a
AG     U        U  U   ---   a

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

GL018700.1: 10705716-10705773 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from ocu-mir-508

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-508-5p

Accession	MIMAT0048509
Description	Oryctolagus cuniculus ocu-miR-508-5p mature miRNA
Sequence	1 - UACUCCAGAGGGUGUCACUCA - 21
Evidence	experimental Illumina [1]

Mature ocu-miR-508-3p

Accession	MIMAT0048510
Description	Oryctolagus cuniculus ocu-miR-508-3p mature miRNA
Sequence	38 - AUUGUCACCUUUUUGAGUAGA - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344