miRBase entry: ocu-mir-513

Stem-loop ocu-mir-513


Accession
MI0039439
Description
Oryctolagus cuniculus ocu-mir-513 precursor miRNA


Sequence

UUCACAAGAAGGUGUCAUUCAUGugaaccaaaaauaUGAAUGAUGCCUUUUUGAGAAAA
(((.((((((((((((((((((((.........)))))))))))))))))))).)))..

Structure
--   A                    gaa 
  UUC CAAGAAGGUGUCAUUCAUGu   c
  ||| ||||||||||||||||||||   c
  AAG GUUUUUCCGUAGUAAGUaua   a
AA   A                    aaa 


Annotation confidence Not enough data
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Genome context
GL018700.1: 10678464-10678522 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ocu-mir-513
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-513-5p

Accession MIMAT0048513
Description Oryctolagus cuniculus ocu-miR-513-5p mature miRNA
Sequence 1 - UUCACAAGAAGGUGUCAUUCAUG - 23
Evidence experimental
Illumina [1]

Mature ocu-miR-513-3p

Accession MIMAT0048514
Description Oryctolagus cuniculus ocu-miR-513-3p mature miRNA
Sequence 37 - UGAAUGAUGCCUUUUUGAGAAAA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344