miRBase entry: ocu-mir-758

Stem-loop ocu-mir-758


Accession
MI0039465
Description
Oryctolagus cuniculus ocu-mir-758 precursor miRNA


Sequence

AUGGUUGACCAGAGAGCACACGcuuuauuugugccgUUUGUGACCUGGUCCACUAACCCU
.((((.((((((.(.(((.((((.........).))).)))..))))))).)))).....

Structure
----A    U      A -A   C   - uuu 
     UGGU GACCAG G  GCA ACG c   a
     |||| |||||| |  ||| ||| |   u
     AUCA CUGGUC C  UGU Ugc g   u
UCCCA    C      - AG   U   c ugu 


Annotation confidence Not enough data
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Genome context
GL019048.1: 125317-125376 [+]
Clustered miRNAs
12 other miRNAs are < 10 kb from ocu-mir-758
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-758-5p

Accession MIMAT0048565
Description Oryctolagus cuniculus ocu-miR-758-5p mature miRNA
Sequence 1 - AUGGUUGACCAGAGAGCACACG - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-758-3p

Accession MIMAT0048566
Description Oryctolagus cuniculus ocu-miR-758-3p mature miRNA
Sequence 37 - UUUGUGACCUGGUCCACUAACCCU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344