miRBase entry: ocu-mir-12092

Stem-loop ocu-mir-12092

Accession

MI0039494

Description

Oryctolagus cuniculus ocu-mir-12092 precursor miRNA

Sequence

UGGAGUUCCGGGUAGUCCAGAGCcgggagucaggcUCUAGCCGCCCGAAACACCCGC
.((.(((.(((((.((..((((((........)))))).)).))))).))).))...

Structure

--U  A   C     A  CC      ggg 
   GG GUU CGGGU GU  AGAGCc   a
   || ||| ||||| ||  ||||||    
   CC CAA GCCCG CG  UCUcgg   g
CGC  A   A     C  -A      acu

Annotation confidence Not enough data

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Genome context

CM000811.1: 108854560-108854616 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from ocu-mir-12092

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-12092-5p

Accession	MIMAT0048623
Description	Oryctolagus cuniculus ocu-miR-12092-5p mature miRNA
Sequence	1 - UGGAGUUCCGGGUAGUCCAGAGC - 23
Evidence	experimental Illumina [1]

Mature ocu-miR-12092-3p

Accession	MIMAT0048624
Description	Oryctolagus cuniculus ocu-miR-12092-3p mature miRNA
Sequence	36 - UCUAGCCGCCCGAAACACCCGC - 57
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344