miRBase entry: csi-MIR403b

Stem-loop csi-MIR403b


Accession
MI0039671
Description
Citrus sinensis csi-MIR403b precursor miRNA


Sequence

ggggcacaucucaAGUUUGUGCGUGAAUCUAACCccaucacagccguccguuuucccgcucucaucugauggcgUUAGAUUCACGCACAAACUCGcgaucugucc
.(((((.(((.(.((((((((((((((((((((.((((((.....(..((......))..).....)))))).)))))))))))))))))))).).))).)))))

Structure
g     c   u a                    C      cagcc uc  uu 
 gggca auc c AGUUUGUGCGUGAAUCUAAC ccauca     g  cg  u
 ||||| ||| | |||||||||||||||||||| ||||||     |  ||   
 ccugu uag G UCAAACACGCACUUAGAUUg gguagu     c  gc  u
-     c   c C                    c      cuacu uc  cc 


Annotation confidence Not enough data
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Genome context
chr9: 719780-719884 [+]

Database links

Mature csi-miR403b-5p

Accession MIMAT0048937
Description Citrus sinensis csi-miR403b-5p mature miRNA
Sequence 14 - AGUUUGUGCGUGAAUCUAACC - 34
Evidence experimental
Illumina [1]

Mature csi-miR403b-3p

Accession MIMAT0048938
Description Citrus sinensis csi-miR403b-3p mature miRNA
Sequence 75 - UUAGAUUCACGCACAAACUCG - 95
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28054378
    MicroRNA annotation of plant genomes - Do it right or not at all
    "Taylor RS, Tarver JE, Foroozani A, Donoghue PC"
    Bioessays (2017) 39:1600113