Stem-loop csi-MIR2275a

Accession

MI0039678

Description

Citrus sinensis csi-MIR2275a precursor miRNA

Sequence

cccuucauuugcauuucuaaguuguauguaAGAAUUGGAUGGAACUAAACAgauuaguaagaucaaaauauucaguugcugUUUAGUUUCCUCCAAUAUCUUAucuccagcuucuaaacuauauauauaaacc
..................((((((...((((((((((((.((((((((((((..........................)))))))))))).)))))).))))))...))))))....................

Structure

--cccuucauuugcauuucu      uau      -      U            auuaguaagauc 
                    aaguug   guaAGA AUUGGA GGAACUAAACAg            a
                    ||||||   |||||| |||||| ||||||||||||             
                    uucgac   uAUUCU UAACCU CUUUGAUUUguc            a
ccaaauauauauaucaaauc      cuc      A      C            guugacuuauaa 

Annotation confidence Not enough data

Genome context

chr6: 20307148-20307280 [+]

Mature csi-miR2275a-5p

• Accession: MIMAT0048950
• Description: Citrus sinensis csi-miR2275a-5p mature miRNA
• Sequence: 31 - AGAAUUGGAUGGAACUAAACA - 51
• Evidence: experimental ; Illumina [1]

Mature csi-miR2275a-3p

• Accession: MIMAT0048951
• Description: Citrus sinensis csi-miR2275a-3p mature miRNA
• Sequence: 82 - UUUAGUUUCCUCCAAUAUCUUA - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28054378
   MicroRNA annotation of plant genomes - Do it right or not at all
   "Taylor RS, Tarver JE, Foroozani A, Donoghue PC"
   Bioessays (2017) 39:1600113