miRBase entry: csi-MIR156h

Stem-loop csi-MIR156h


Accession
MI0039701
Description
Citrus sinensis csi-MIR156h precursor miRNA

Literature search
7 open access papers mention csi-MIR156h
(37 sentences)

Sequence

gaacuuuuguugACAGAAGAUAGAGAACACAUAaauuaaaaugccauuaaucaaacgcauuuuaaaucuuugugcucucuauauucugucaucaacgugca
......(((.((((((((.(((((((.((((....(((((((((............))))))))).....)))).))))))).)))))))).)))......

Structure
gaacuu   u        G       A    -UAaa         cauua 
      uug ugACAGAA AUAGAGA CACA     uuaaaaugc     a
      ||| |||||||| ||||||| ||||     |||||||||      
      aac acugucuu uaucucu gugu     aauuuuacg     u
acgugc   u        a       c    uucua         caaac 


Annotation confidence Not enough data
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Genome context
chr2: 10039848-10039948 [+]

Database links

Mature csi-miR156h-5p

Accession MIMAT0048989
Description Citrus sinensis csi-miR156h-5p mature miRNA
Sequence 13 - ACAGAAGAUAGAGAACACAUA - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28054378
    MicroRNA annotation of plant genomes - Do it right or not at all
    "Taylor RS, Tarver JE, Foroozani A, Donoghue PC"
    Bioessays (2017) 39:1600113