miRBase entry: ppa-mir-549-1

Stem-loop ppa-mir-549-1


Accession
MI0039806
Description
Pan paniscus ppa-mir-549-1 precursor miRNA


Sequence

AGCUCAUCCAUAGUUGUCACUGucucagaucagugacaacuauggaugagcucu
((((((((((((((((((((((........))))))))))))))))))))))..

Structure
--                      ucu 
  AGCUCAUCCAUAGUUGUCACUG   c
  ||||||||||||||||||||||    
  ucgaguagguaucaacagugac   a
uc                      uag 


Annotation confidence Not enough data
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Genome context
chr15: 78779366-78779419 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ppa-mir-549-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppa-miR-549

Accession MIMAT0049096
Description Pan paniscus ppa-miR-549 mature miRNA
Sequence 1 - AGCUCAUCCAUAGUUGUCACUG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596