miRBase entry: ppa-mir-532

Stem-loop ppa-mir-532


Accession
MI0039814
Description
Pan paniscus ppa-mir-532 precursor miRNA


Sequence

CAUGCCUUGAGUGUAGGACCguuggcaucuuaauuacccucccacacccaaggcuugca
((.((((((.((((.(((..((.............))..))).)))).)))))).))..

Structure
--  U      A    A   CC  uggca 
  CA GCCUUG GUGU GGA  gu     u
  || |||||| |||| |||  ||     c
  gu cggaac caca ccu  ca     u
ac  u      c    c   cc  uuaau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrX: 49929848-49929906 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ppa-mir-532
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppa-miR-532

Accession MIMAT0049102
Description Pan paniscus ppa-miR-532 mature miRNA
Sequence 1 - CAUGCCUUGAGUGUAGGACC - 20
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596