miRBase entry: dma-mir-199

Stem-loop dma-mir-199


Accession
MI0040002
Description
Daubentonia madagascariensis dma-mir-199 precursor miRNA


Sequence

cccaguguucagacuaccuguucaggacaaugccguuguACAGUAGUCUGCACAUUGGUU
.(((((((.((((((((.(((.((((......))..)).))))))))))).)))))))..

Structure
-c       u        c   u  --  ac 
  ccagugu cagacuac ugu ca  gg  a
  ||||||| |||||||| ||| ||  ||   
  GGUUACA GUCUGAUG ACA gu  cc  a
UU       C        -   u  ug  gu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
AGTM011632669.1: 2358-2417 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dma-mir-199
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dma-miR-199

Accession MIMAT0049273
Description Daubentonia madagascariensis dma-miR-199 mature miRNA
Sequence 40 - ACAGUAGUCUGCACAUUGGUU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596