miRBase entry: cja-mir-409

Stem-loop cja-mir-409


Accession
MI0040060
Description
Callithrix jacchus cja-mir-409 precursor miRNA


Sequence

agguuacccgagcaacuuugcaucuagacgacGAAUGUUGCUCGGUGAACCCCU
.((((..((((((((((((((........).)))).)))))))))..))))...

Structure
--a    ac         -    - auc 
   gguu  ccgagcaac uuug c   u
   ||||  ||||||||| |||| |    
   CCAA  GGCUCGUUG AAGc g   a
UCC    GU         U    a cag 


Annotation confidence Not enough data
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Genome context
chr10: 126984150-126984203 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from cja-mir-409
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-409

Accession MIMAT0049324
Description Callithrix jacchus cja-miR-409 mature miRNA
Sequence 33 - GAAUGUUGCUCGGUGAACCCCU - 54
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596