miRBase entry: cja-let-7f

Stem-loop cja-let-7f


Accession
MI0040064
Description
Callithrix jacchus cja-let-7f precursor miRNA


Sequence

UGAGGUAGUAGAUUGUAUAGUUgugggguagugauuuuacccuguucaggagauaacuauacaaucuauugccu
..(((((((((((((((((((((((((((((.....))))))).........))))))))))))))))))))))

Structure
UG                      ---------       u 
  AGGUAGUAGAUUGUAUAGUUgu         gggguag g
  ||||||||||||||||||||||         ||||||| a
  uccguuaucuaacauaucaaua         ucccauu u
--                      gaggacuug       u 


Annotation confidence Not enough data
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Genome context
chr1: 76827633-76827706 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cja-let-7f
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-let-7f

Accession MIMAT0049328
Description Callithrix jacchus cja-let-7f mature miRNA
Sequence 1 - UGAGGUAGUAGAUUGUAUAGUU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596