miRBase entry: nle-mir-542

Stem-loop nle-mir-542


Accession
MI0040130
Description
Nomascus leucogenys nle-mir-542 precursor miRNA


Sequence

ucggggaucaucaugucacgagauaccagugugcacuUGUGACAGAUUGAUAACUGAAA
((((..((((...(((((((((.(((....)))..)))))))))...))))..))))..

Structure
--    gg    uca         -a   c 
  ucgg  auca   ugucacgag  uac a
  ||||  ||||   |||||||||  |||  
  AGUC  UAGU   ACAGUGUuc  gug g
AA    AA    UAG         ac   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrX: 121201639-121201697 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from nle-mir-542
Name Accession Chromosome Start End Strand Confidence




Database links

Mature nle-miR-542

Accession MIMAT0049392
Description Nomascus leucogenys nle-miR-542 mature miRNA
Sequence 38 - UGUGACAGAUUGAUAACUGAAA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596