miRBase entry: oga-mir-18

Stem-loop oga-mir-18


Accession
MI0040430
Description
Otolemur garnettii oga-mir-18 precursor miRNA


Sequence

UAAGGUGCAUCUAGUGCAGAUAGugaaguagauuagcaucuacugcccuaagugcuccuuc
.((((.((((.(((.((((.(((((..(.....)..)).))))))).))).)))).)))).

Structure
U    U    C   U    A   -  aa u 
 AAGG GCAU UAG GCAG UAG ug  g a
 |||| |||| ||| |||| ||| ||  | g
 uucc cgug auc cguc auc ac  u a
c    u    a   c    -   u  ga u 


Annotation confidence Not enough data
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Genome context
GL873553.1: 1557694-1557754 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from oga-mir-18
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oga-miR-18

Accession MIMAT0049647
Description Otolemur garnettii oga-miR-18 mature miRNA
Sequence 1 - UAAGGUGCAUCUAGUGCAGAUAG - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596