miRBase entry: oga-mir-16-1

Stem-loop oga-mir-16-1


Accession
MI0040466
Description
Otolemur garnettii oga-mir-16-1 precursor miRNA


Sequence

UAGCAGCACGUAAAUAUUGGCGuuaagauucuaaaauuaucuccaguauuaacugugcugcugaa
(((((((((((.((((((((.(.(((..........))).).)))))))).)).)))))))))..

Structure
--         -  A        C u   gauu 
  UAGCAGCAC GU AAUAUUGG G uaa    c
  ||||||||| || |||||||| | |||     
  gucgucgug ca uuaugacc c auu    u
aa         u  a        u u   aaaa 


Annotation confidence Not enough data
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Genome context
GL873701.1: 1619546-1619610 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from oga-mir-16-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oga-miR-16

Accession MIMAT0049609
Description Otolemur garnettii oga-miR-16 mature miRNA
Sequence 1 - UAGCAGCACGUAAAUAUUGGCG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596