Stem-loop aof-MIR12153

Accession

MI0040530

Description

Asparagus officinalis aof-MIR12153 precursor miRNA

Sequence

agaccgggagGGCCAAAAUGGACGUAGUGUCugaauacacuaucuuuauaggccuccuaguac
..((.((((((.((...(((((.(((((((......))))))).))))).)))))))).))..

Structure

ag  c      G  AAA     C       Cu 
  ac gggagG CC   AUGGA GUAGUGU  g
  || |||||| ||   ||||| |||||||   
  ug uccucc gg   uauuu uaucaca  a
ca  a      -  --a     c       ua 

Annotation confidence Not enough data

Genome context

chr1: 19323779-19323841 [+]

Mature aof-miR12153

• Accession: MIMAT0049736
• Description: Asparagus officinalis aof-miR12153 mature miRNA
• Sequence: 11 - GGCCAAAAUGGACGUAGUGUC - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29093472
   The asparagus genome sheds light on the origin and evolution of a young Y chromosome
   Harkess A, Zhou J, Xu C, Bowers JE, Van der Hulst R, Ayyampalayam S, Mercati F, Riccardi P, McKain MR, Kakrana A, Tang H, Ray J, Groenendijk J, Arikit S, Mathioni SM, Nakano M, Shan H, Telgmann-Rauber A, Kanno A, Yue Z, Chen H, Li W, Chen Y, Xu X, Zhang Y
   Nat Commun (2017) 8:1279