miRBase entry: mmu-mir-12178

Stem-loop mmu-mir-12178


Accession
MI0040616
Description
Mus musculus mmu-mir-12178 precursor miRNA


Sequence

4 reads, 0 reads per million, 4 experiments
UAUGGGUGGCUGGUCUCAGAAGAGaccccauuuguaucacuUUUCUGACUCAGCCACCUGAGA
...((((((((((..(((((((((...............))))))))).))))))))))....

Structure
-UAU          UC         acccca 
    GGGUGGCUGG  UCAGAAGAG      u
    ||||||||||  |||||||||      u
    UCCACCGACU  AGUCUUUuc      u
AGAG          -C         acuaug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr1: 164217678-164217740 [+]

Database links

Mature mmu-miR-12178-5p

Accession MIMAT0049822
Description Mus musculus mmu-miR-12178-5p mature miRNA
Sequence 1 - UAUGGGUGGCUGGUCUCAGAAGAG - 24
Evidence experimental
Illumina [1]

Mature mmu-miR-12178-3p

Accession MIMAT0049823
Description Mus musculus mmu-miR-12178-3p mature miRNA
Sequence 42 - UUUCUGACUCAGCCACCUGAGA - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973