miRBase entry: mmu-mir-203b

Stem-loop mmu-mir-203b


Accession
MI0040622
Description
Mus musculus mmu-mir-203b precursor miRNA

Literature search
2 open access papers mention mmu-mir-203b
(2 sentences)

Sequence

135656 reads, 21 reads per million, 101 experiments
AGUGGUCCUAAACAUUUCACaauugugcuacagaacugUUGAACUGUCAAGAACCACUGG
((((((.((..(((.((((((.((.((...)).)).)).)))).)))..)).))))))..

Structure
--      C  AA   U    -  a  g  c 
  AGUGGU CU  ACA UUCA Ca uu ug  
  |||||| ||  ||| |||| || || || u
  UCACCA GA  UGU AAGU gu aa ac  
GG      A  AC   C    U  c  g  a 


Annotation confidence Not enough data
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Genome context
chr12: 112130887-112130946 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-203b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-203b-5p

Accession MIMAT0049831
Description Mus musculus mmu-miR-203b-5p mature miRNA
Sequence 1 - AGUGGUCCUAAACAUUUCAC - 20
Evidence experimental
Illumina [1]

Mature mmu-miR-203b-3p

Accession MIMAT0049832
Description Mus musculus mmu-miR-203b-3p mature miRNA
Sequence 39 - UUGAACUGUCAAGAACCACUGG - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973