miRBase entry: gga-mir-12212

Stem-loop gga-mir-12212


Accession
MI0040660
Description
Gallus gallus gga-mir-12212 precursor miRNA


Sequence

4 reads, 1 reads per million, 3 experiments
CCGGGCGGGAGGGGAGCGGCcugcuugcuggcggggccggcccauuguugccgccuucaa
..((((((.(((((..(((((((((....))).)))))).)))....)).))))))....

Structure
--CC      G  ----   AG      -   u 
    GGGCGG AG    GGG  CGGCcu gcu g
    |||||| ||    |||  |||||| |||  
    uccgcc uu    ccc  gccggg cgg c
aacu      g  guua   -g      g   u 


Annotation confidence Not enough data
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Genome context
chr1: 71873602-71873661 [-]

Database links

Mature gga-miR-12212-5p

Accession MIMAT0049891
Description Gallus gallus gga-miR-12212-5p mature miRNA
Sequence 1 - CCGGGCGGGAGGGGAGCGGC - 20
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973