miRBase entry: gga-mir-12219

Stem-loop gga-mir-12219


Accession
MI0040671
Description
Gallus gallus gga-mir-12219 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
AGGAGCAGGGGGUGGUCAAGCUGAcggacuuuggcuucaGCAACCGCUUCCAGCCCGGCA
.((.((.(((((((((...(((((.(........).))))).))))))))).))))....

Structure
---A  A  A         CAA     c gac 
    GG GC GGGGGUGGU   GCUGA g   u
    || || |||||||||   ||||| |    
    CC CG CCUUCGCCA   CGacu c   u
ACGG  -  A         --A     u ggu 


Annotation confidence Not enough data
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Genome context
chr11: 1463266-1463325 [+]

Database links

Mature gga-miR-12219-5p

Accession MIMAT0049910
Description Gallus gallus gga-miR-12219-5p mature miRNA
Sequence 1 - AGGAGCAGGGGGUGGUCAAGCUGA - 24
Evidence experimental
Illumina [1]

Mature gga-miR-12219-3p

Accession MIMAT0049911
Description Gallus gallus gga-miR-12219-3p mature miRNA
Sequence 40 - GCAACCGCUUCCAGCCCGGCA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973