miRBase entry: gga-mir-12225

Stem-loop gga-mir-12225


Accession
MI0040680
Description
Gallus gallus gga-mir-12225 precursor miRNA


Sequence

32 reads, 1 reads per million, 4 experiments
gACCUCACCCCGAUGGCGUAGCGgacgaccccggcgcgcUCCGCCUGCGGGAUGACGUCGC
(((.(((.((((..((((.((((..((....))...)))).))))..)))).))).)))..

Structure
--   C   C    AU    U    -ga  a 
  gAC UCA CCCG  GGCG AGCG   cg c
  ||| ||| ||||  |||| ||||   ||  
  CUG AGU GGGC  CCGC Ucgc   gc c
CG   C   A    GU    C    gcg  c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr14: 15022038-15022098 [-]

Database links

Mature gga-miR-12225-5p

Accession MIMAT0049927
Description Gallus gallus gga-miR-12225-5p mature miRNA
Sequence 2 - ACCUCACCCCGAUGGCGUAGCG - 23
Evidence experimental
Illumina [1]

Mature gga-miR-12225-3p

Accession MIMAT0049928
Description Gallus gallus gga-miR-12225-3p mature miRNA
Sequence 40 - UCCGCCUGCGGGAUGACGUCGC - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973