miRBase entry: gga-mir-12236

Stem-loop gga-mir-12236


Accession
MI0040697
Description
Gallus gallus gga-mir-12236 precursor miRNA


Sequence

44 reads, 1 reads per million, 4 experiments
AUUGAUUCAUUCUUUGCUCUUCUaauuauaagaggaAGUGCAAAUUAUGAAUAAUGGa
....((((((..(((((.(((((..........))))).)))))..))))))......

Structure
--AUUG      UC     U     aauu 
      AUUCAU  UUUGC CUUCU    a
      ||||||  ||||| |||||     
      UAAGUA  AAACG GAagg    u
aGGUAA      UU     U     agaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr19: 8077899-8077956 [+]

Database links

Mature gga-miR-12236-5p

Accession MIMAT0049960
Description Gallus gallus gga-miR-12236-5p mature miRNA
Sequence 1 - AUUGAUUCAUUCUUUGCUCUUCU - 23
Evidence experimental
Illumina [1]

Mature gga-miR-12236-3p

Accession MIMAT0049961
Description Gallus gallus gga-miR-12236-3p mature miRNA
Sequence 37 - AGUGCAAAUUAUGAAUAAUGG - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973