miRBase entry: gga-mir-12239

Stem-loop gga-mir-12239


Accession
MI0040701
Description
Gallus gallus gga-mir-12239 precursor miRNA


Sequence

104 reads, 3 reads per million, 5 experiments
AUGUUGCUGGAAGGAGCAGAggacaugugaggucUCUGCUGCUUUCUGCUGGCAUCA
(((((((.(((((.(((((((..(......)..))))))).))))).)).)))))..

Structure
--     -  U     G       ga au 
  AUGUU GC GGAAG AGCAGAg  c  g
  ||||| || ||||| |||||||  |   
  UACGG CG CUUUC UCGUCUc  g  u
AC     U  U     G       ug ag 


Annotation confidence Not enough data
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Genome context
chr2: 6407952-6408008 [-]

Database links

Mature gga-miR-12239-5p

Accession MIMAT0049967
Description Gallus gallus gga-miR-12239-5p mature miRNA
Sequence 1 - AUGUUGCUGGAAGGAGCAGA - 20
Evidence experimental
Illumina [1]

Mature gga-miR-12239-3p

Accession MIMAT0049968
Description Gallus gallus gga-miR-12239-3p mature miRNA
Sequence 35 - UCUGCUGCUUUCUGCUGGCAUCA - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973