miRBase entry: gga-mir-12246

Stem-loop gga-mir-12246


Accession
MI0040709
Description
Gallus gallus gga-mir-12246 precursor miRNA


Sequence

139 reads, 3 reads per million, 4 experiments
UUGGGUGGACGGUUGGACUUGAugguuguaguggucUUUUCCAACCUUCUUCCCCCCu
..(((.(((.(((((((...(((.(......).)))...))))))).))).)))....

Structure
--UU   U   C       CUU   g uu 
    GGG GGA GGUUGGA   GAu g  g
    ||| ||| |||||||   ||| |   
    CCC UCU CCAACCU   cug u  u
uCCC   U   U       UUU   g ga 


Annotation confidence Not enough data
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Genome context
chr21: 5006616-5006673 [-]

Database links

Mature gga-miR-12246-5p

Accession MIMAT0049981
Description Gallus gallus gga-miR-12246-5p mature miRNA
Sequence 1 - UUGGGUGGACGGUUGGACUUGA - 22
Evidence experimental
Illumina [1]

Mature gga-miR-12246-3p

Accession MIMAT0049982
Description Gallus gallus gga-miR-12246-3p mature miRNA
Sequence 37 - UUUUCCAACCUUCUUCCCCCC - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973