miRBase entry: gga-mir-12253

Stem-loop gga-mir-12253


Accession
MI0040718
Description
Gallus gallus gga-mir-12253 precursor miRNA


Sequence

6 reads, 0 reads per million, 3 experiments
GGCGGGAGCUGAGGGGGGGAGGggagggugucugagcuccguccugaugugcCCUCUGCCCCUCUCCUCCCGCAgc
.(((((((..((((((.((((((((.((.((....)).)).))........)))))).))))))..)))))))...

Structure
--G       CU      G      --------  g  u  c 
   GCGGGAG  GAGGGG GGAGGg        ga gg gu u
   |||||||  |||||| ||||||        || || ||  
   CGCCCUC  CUCCCC UCUCCc        cu cc cg g
cgA       CU      G      guguaguc  g  u  a 


Annotation confidence Not enough data
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Genome context
chr26: 3215885-3215960 [+]

Database links

Mature gga-miR-12253-5p

Accession MIMAT0049997
Description Gallus gallus gga-miR-12253-5p mature miRNA
Sequence 1 - GGCGGGAGCUGAGGGGGGGAGG - 22
Evidence experimental
Illumina [1]

Mature gga-miR-12253-3p

Accession MIMAT0049998
Description Gallus gallus gga-miR-12253-3p mature miRNA
Sequence 53 - CCUCUGCCCCUCUCCUCCCGCA - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973