miRBase entry: gga-mir-12254

Stem-loop gga-mir-12254


Accession
MI0040719
Description
Gallus gallus gga-mir-12254 precursor miRNA


Sequence

12 reads, 0 reads per million, 2 experiments
UAUGGGGGCACAGAAGGGUCAUUGggguacagcagggucccAAACAUCCUCUCCUGCCCCCAGU
..((((((((.(((.((((..((((((..(....)..))))))..)))))))..))))))))..

Structure
UA        -C   A    CA      ua a 
  UGGGGGCA  AGA GGGU  UUGggg  c g
  ||||||||  ||| ||||  ||||||  |  
  ACCCCCGU  UCU CCUA  AAcccu  g c
UG        CC   -    CA      gg a 


Annotation confidence Not enough data
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Genome context
chr27: 1416582-1416645 [+]

Database links

Mature gga-miR-12254-5p

Accession MIMAT0049999
Description Gallus gallus gga-miR-12254-5p mature miRNA
Sequence 1 - UAUGGGGGCACAGAAGGGUCAUUG - 24
Evidence experimental
Illumina [1]

Mature gga-miR-12254-3p

Accession MIMAT0050000
Description Gallus gallus gga-miR-12254-3p mature miRNA
Sequence 42 - AAACAUCCUCUCCUGCCCCCAGU - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973