miRBase entry: gga-mir-12270

Stem-loop gga-mir-12270


Accession
MI0040737
Description
Gallus gallus gga-mir-12270 precursor miRNA


Sequence

3 reads, 0 reads per million, 1 experiments
UCAGUAAGUGCCCUGUGGGUAUGgguggcuggcugagacccCAGCCCUGGGCAUUUGCAUUCU
...((((((((((...((((..((((..(.....)..))))..)))).)))))))))).....

Structure
--UCA          UGU    AU    gg u 
     GUAAGUGCCC   GGGU  Gggu  c g
     ||||||||||   ||||  ||||  | g
     CGUUUACGGG   CCCG  ccca  g c
UCUUA          --U    AC    ga u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr4: 17843445-17843507 [-]

Database links

Mature gga-miR-12270-5p

Accession MIMAT0050033
Description Gallus gallus gga-miR-12270-5p mature miRNA
Sequence 1 - UCAGUAAGUGCCCUGUGGGUAUG - 23
Evidence experimental
Illumina [1]

Mature gga-miR-12270-3p

Accession MIMAT0050034
Description Gallus gallus gga-miR-12270-3p mature miRNA
Sequence 42 - CAGCCCUGGGCAUUUGCAUUCU - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973