miRBase entry: mdo-mir-12300

Stem-loop mdo-mir-12300


Accession
MI0040788
Description
Monodelphis domestica mdo-mir-12300 precursor miRNA


Sequence

9 reads, 1 reads per million, 3 experiments
AGCCCACUUACCUCCUCGACAUagacacuucaaaaaaugUACAGGAAGAAAGUGGAUGCAU
.((((((((.(.((((..((((..............))))..)))).).))))))..))..

Structure
-A  --      A C    CG    agacac 
  GC  CCACUU C UCCU  ACAU      u
  ||  |||||| | ||||  ||||       
  CG  GGUGAA G AGGA  Ugua      u
UA  UA      A A    CA    aaaaac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr1: 266108106-266108166 [-]

Database links

Mature mdo-miR-12300-5p

Accession MIMAT0050110
Description Monodelphis domestica mdo-miR-12300-5p mature miRNA
Sequence 1 - AGCCCACUUACCUCCUCGACAU - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-12300-3p

Accession MIMAT0050111
Description Monodelphis domestica mdo-miR-12300-3p mature miRNA
Sequence 40 - UACAGGAAGAAAGUGGAUGCAU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973