miRBase entry: mdo-mir-352

Stem-loop mdo-mir-352


Accession
MI0040801
Description
Monodelphis domestica mdo-mir-352 precursor miRNA


Sequence

375 reads, 7 reads per million, 5 experiments
uAGGACUGUCUAACCUGAGAAUGgugaaucucagggucaAUCUCAGGUUUGUCAGCCCAUGa
..((.(((.(.(((((((((.((((((...)))...))).))))))))).).))).))....

Structure
--uA  A   U U         A   ---   a 
    GG CUG C AACCUGAGA UGg   uga  
    || ||| | ||||||||| |||   ||| u
    CC GAC G UUGGACUCU acu   acu  
aGUA  C   U U         A   ggg   c 


Annotation confidence Not enough data
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Genome context
chr1: 472807066-472807127 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-352
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-352-5p

Accession MIMAT0050134
Description Monodelphis domestica mdo-miR-352-5p mature miRNA
Sequence 2 - AGGACUGUCUAACCUGAGAAUG - 23
Evidence experimental
Illumina [1]

Mature mdo-miR-352-3p

Accession MIMAT0050135
Description Monodelphis domestica mdo-miR-352-3p mature miRNA
Sequence 40 - AUCUCAGGUUUGUCAGCCCAUG - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973