miRBase entry: mdo-mir-12309

Stem-loop mdo-mir-12309


Accession
MI0040802
Description
Monodelphis domestica mdo-mir-12309 precursor miRNA


Sequence

13 reads, 1 reads per million, 3 experiments
ACAGUACAUGACUUAAAGUGAguuaauuagcaagcauUACUUUGUGCCAAGUACUGAUC
.((((((.((.(.(((((((((((........))).)))))))).).)).))))))...

Structure
--A      A  A U        -   aau 
   CAGUAC UG C UAAAGUGA guu   u
   |||||| || | |||||||| |||    
   GUCAUG AC G GUUUCAUu cga   a
CUA      A  C U        a   acg 


Annotation confidence Not enough data
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Genome context
chr1: 473547946-473548004 [+]

Database links

Mature mdo-miR-12309-5p

Accession MIMAT0050136
Description Monodelphis domestica mdo-miR-12309-5p mature miRNA
Sequence 1 - ACAGUACAUGACUUAAAGUGA - 21
Evidence experimental
Illumina [1]

Mature mdo-miR-12309-3p

Accession MIMAT0050137
Description Monodelphis domestica mdo-miR-12309-3p mature miRNA
Sequence 38 - UACUUUGUGCCAAGUACUGAUC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973