Stem-loop mdo-mir-1306

Accession

MI0040858

Description

Monodelphis domestica mdo-mir-1306 precursor miRNA

Sequence

32 reads, 2 reads per million, 5 experiments

CCACCUCCCCUGCAAACGUCCagugacgcagacguaauggACGUUGGCUCUGGUGGUGCUG
.((((.((...((.((((((((...(((....)))..)))))))).))...)).))))...

Structure

--C    U  CCU  A        gug   c 
   CACC CC   GC AACGUCCa   acg a
   |||| ||   || ||||||||   |||  
   GUGG GG   CG UUGCAggu   ugc g
GUC    U  UCU  G        -aa   a 

Annotation confidence Not enough data

Genome context

chr3: 510012158-510012218 [-]

Mature mdo-miR-1306-5p

• Accession: MIMAT0050231
• Description: Monodelphis domestica mdo-miR-1306-5p mature miRNA
• Sequence: 1 - CCACCUCCCCUGCAAACGUCC - 21
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-1306-3p

• Accession: MIMAT0050232
• Description: Monodelphis domestica mdo-miR-1306-3p mature miRNA
• Sequence: 41 - ACGUUGGCUCUGGUGGUGCUG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973