miRBase entry: mdo-mir-12381

Stem-loop mdo-mir-12381


Accession
MI0040913
Description
Monodelphis domestica mdo-mir-12381 precursor miRNA


Sequence

4 reads, 0 reads per million, 1 experiments
AGGAAAAAAGAUUAAUUCCAGAcaguuuacuauucUGGAAGCAUCUCUUUUUCUCUUG
.(((((((((((...(((((((.((....))..)))))))..)))).)))))))....

Structure
---A       -    UAA       -c  u 
    GGAAAAA AGAU   UUCCAGA  ag u
    ||||||| ||||   |||||||  ||  
    UCUUUUU UCUA   AAGGUcu  uc u
GUUC       C    -CG       ua  a 


Annotation confidence Not enough data
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Genome context
chr6: 214449772-214449829 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-12381
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-12381-5p

Accession MIMAT0050325
Description Monodelphis domestica mdo-miR-12381-5p mature miRNA
Sequence 1 - AGGAAAAAAGAUUAAUUCCAGA - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-12381-3p

Accession MIMAT0050326
Description Monodelphis domestica mdo-miR-12381-3p mature miRNA
Sequence 36 - UGGAAGCAUCUCUUUUUCUCUUG - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973