miRBase entry: mdo-mir-12390

Stem-loop mdo-mir-12390


Accession
MI0040925
Description
Monodelphis domestica mdo-mir-12390 precursor miRNA


Sequence

38 reads, 1 reads per million, 3 experiments
UACACUACAUCUUUUCUUGGACUuugcucucaaaauaaagGUAGAGAAAGGUGUAUUGUAGA
((((.(((((((((.(((..(((((............))))).)))))))))))).))))..

Structure
--    C         U   GG     gcucu 
  UACA UACAUCUUU CUU  ACUuu     c
  |||| ||||||||| |||  |||||      
  AUGU AUGUGGAAA GAG  UGgaa     a
AG    U         -   -A     auaaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr8: 46929987-46930048 [+]

Database links

Mature mdo-miR-12390-5p

Accession MIMAT0050347
Description Monodelphis domestica mdo-miR-12390-5p mature miRNA
Sequence 1 - UACACUACAUCUUUUCUUGGACU - 23
Evidence experimental
Illumina [1]

Mature mdo-miR-12390-3p

Accession MIMAT0050348
Description Monodelphis domestica mdo-miR-12390-3p mature miRNA
Sequence 41 - GUAGAGAAAGGUGUAUUGUAGA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973