miRBase entry: mdo-mir-7375c-4

Stem-loop mdo-mir-7375c-4


Accession
MI0040973
Description
Monodelphis domestica mdo-mir-7375c-4 precursor miRNA


Sequence

1521 reads, 43 reads per million, 3 experiments
UAGCCCUUACCCCCCCAACUAGuaguauuaaucUGUUAGGGAGGGGAAAGGCAUUGCuccuucaucucacagcac
..(((.((.((((((((((.((..........))))).))).)))))).)))..((((............)))).

Structure
---------------------UA   C  A    -   -   U  uagu 
                       GCC UU CCCC CCC AAC AG    a
                       ||| || |||| ||| ||| ||     
                       CGG AA GGGG GGG UUG Uc    u
cacgacacucuacuuccuCGUUA   A  -    A   A   -  uaau 


Annotation confidence High
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Genome context
chrX: 44674236-44674310 [-]
Clustered miRNAs
13 other miRNAs are < 10 kb from mdo-mir-7375c-4
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7375c-4-5p

Accession MIMAT0050427
Description Monodelphis domestica mdo-miR-7375c-4-5p mature miRNA
Sequence 1 - UAGCCCUUACCCCCCCAACUAG - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-7375c-3p

Accession MIMAT0050428
Description Monodelphis domestica mdo-miR-7375c-3p mature miRNA
Sequence 34 - UGUUAGGGAGGGGAAAGGCAUUGC - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973