miRBase entry: mdo-mir-7398v

Stem-loop mdo-mir-7398v


Accession
MI0040983
Description
Monodelphis domestica mdo-mir-7398v precursor miRNA


Sequence

136 reads, 3 reads per million, 5 experiments
UGUGUAGAGGUGGGAAAAUAUGCCguguuuucuuucuaggUAAAUCCUUACCUCUCGCAGU
((((.(((((((((...((.((((..(........)..)))).)).)))))))))))))..

Structure
--    U         AAA  A    gu uuu 
  UGUG AGAGGUGGG   AU UGCC  g   u
  |||| |||||||||   || ||||  |    
  ACGC UCUCCAUUC   UA AUgg  c   c
UG    -         --C  A    au uuu 


Annotation confidence Not enough data
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Genome context
chrX: 57289402-57289462 [+]
Clustered miRNAs
19 other miRNAs are < 10 kb from mdo-mir-7398v
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7398v-5p

Accession MIMAT0050442
Description Monodelphis domestica mdo-miR-7398v-5p mature miRNA
Sequence 1 - UGUGUAGAGGUGGGAAAAUAUGCC - 24
Evidence experimental
Illumina [1]

Mature mdo-miR-7398v-3p

Accession MIMAT0050443
Description Monodelphis domestica mdo-miR-7398v-3p mature miRNA
Sequence 41 - UAAAUCCUUACCUCUCGCAGU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973