miRBase entry: mdo-mir-7398w

Stem-loop mdo-mir-7398w


Accession
MI0040984
Description
Monodelphis domestica mdo-mir-7398w precursor miRNA


Sequence

6290 reads, 114 reads per million, 5 experiments
UGUGUAGAGCCAAGAAAUACGUCGuguuuucucucucucgGUAAAUUUCUUGCCUCUCUCAUU
.(((.((((.((((((((...(((.(..........).)))...)))))))).))))..))).

Structure
U   -U    C        ACG   u uuuu 
 GUG  AGAG CAAGAAAU   UCG g    c
 |||  |||| ||||||||   ||| |     
 UAC  UCUC GUUCUUUA   Ggc c    u
U   UC    C        AAU   u ucuc 


Annotation confidence Not enough data
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Genome context
chrX: 57294562-57294624 [+]
Clustered miRNAs
17 other miRNAs are < 10 kb from mdo-mir-7398w
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7398w-5p

Accession MIMAT0050444
Description Monodelphis domestica mdo-miR-7398w-5p mature miRNA
Sequence 1 - UGUGUAGAGCCAAGAAAUACGUCG - 24
Evidence experimental
Illumina [1]

Mature mdo-miR-7398w-3p

Accession MIMAT0050445
Description Monodelphis domestica mdo-miR-7398w-3p mature miRNA
Sequence 41 - GUAAAUUUCUUGCCUCUCUCAUU - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973