miRBase entry: mdo-mir-7398y

Stem-loop mdo-mir-7398y


Accession
MI0040986
Description
Monodelphis domestica mdo-mir-7398y precursor miRNA


Sequence

275 reads, 5 reads per million, 5 experiments
UGUGUAGAGGGGGAUGAGGAUGCCgugcaaugcugggUAACCUUCCCUUCUCUCACAGU
((((.((((((((..((((.((((..((...))..)))).)))).))))))))))))..

Structure
--    U        AU    A    gu  a 
  UGUG AGAGGGGG  GAGG UGCC  gc  
  |||| ||||||||  |||| ||||  || a
  ACAC UCUCUUCC  UUCC AUgg  cg  
UG    -        -C    A    gu  u 


Annotation confidence Not enough data
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Genome context
chrX: 57318976-57319034 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from mdo-mir-7398y
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7398y-5p

Accession MIMAT0050447
Description Monodelphis domestica mdo-miR-7398y-5p mature miRNA
Sequence 1 - UGUGUAGAGGGGGAUGAGGAUGCC - 24
Evidence experimental
Illumina [1]

Mature mdo-miR-7398y-3p

Accession MIMAT0050448
Description Monodelphis domestica mdo-miR-7398y-3p mature miRNA
Sequence 38 - UAACCUUCCCUUCUCUCACAGU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973