miRBase entry: mdo-mir-12405

Stem-loop mdo-mir-12405


Accession
MI0040988
Description
Monodelphis domestica mdo-mir-12405 precursor miRNA


Sequence

17 reads, 1 reads per million, 3 experiments
UAGUCCCAACUCCGCCACUAAGgucgcauaguuguuUAGUGGAAGAACUGGGAUUAGA
((((((((..((..(((((((....(((....))))))))))..))..))))))))..

Structure
--        AC  CG       Gguc   u 
  UAGUCCCA  UC  CCACUAA    gca a
  ||||||||  ||  |||||||    |||  
  AUUAGGGU  AG  GGUGAUu    ugu g
AG        CA  AA       ----   u 


Annotation confidence Not enough data
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Genome context
chrX: 63602585-63602642 [+]

Database links

Mature mdo-miR-12405-5p

Accession MIMAT0050451
Description Monodelphis domestica mdo-miR-12405-5p mature miRNA
Sequence 1 - UAGUCCCAACUCCGCCACUAAG - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-12405-3p

Accession MIMAT0050452
Description Monodelphis domestica mdo-miR-12405-3p mature miRNA
Sequence 37 - UAGUGGAAGAACUGGGAUUAGA - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973