miRBase entry: mdo-mir-12408

Stem-loop mdo-mir-12408


Accession
MI0040991
Description
Monodelphis domestica mdo-mir-12408 precursor miRNA


Sequence

28 reads, 2 reads per million, 1 experiments
UUGCAGCCCCCAAGGAGCAGccuuugaaauugggcguuggUUCUCCUUAAGAGACUGCAAGC
(((((((.(..((((((.((((..((........))..))))))))))..).).))))))..

Structure
--      - C CC      C    uu  aaa 
  UUGCAG C C  AAGGAG AGcc  ug   u
  |||||| | |  |||||| ||||  ||    
  AACGUC G G  UUCCUC UUgg  gc   u
CG      A A AA      -    uu  ggg 


Annotation confidence Not enough data
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Genome context
chrX: 67783335-67783396 [-]

Database links

Mature mdo-miR-12408-5p

Accession MIMAT0050457
Description Monodelphis domestica mdo-miR-12408-5p mature miRNA
Sequence 1 - UUGCAGCCCCCAAGGAGCAG - 20
Evidence experimental
Illumina [1]

Mature mdo-miR-12408-3p

Accession MIMAT0050458
Description Monodelphis domestica mdo-miR-12408-3p mature miRNA
Sequence 41 - UUCUCCUUAAGAGACUGCAAGC - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973